Kneser, T and McCaskill, JS "Compact matrix display" Tugboat (1988) 9(279-282.
McCaskill, JS "Polymer chemistry on tape: a computational model for emergent genetics" Technical Report (1988) Max-Planck-Institut for Biophysical Chemistry, Göttingen Germany.

Bauer, GJ, McCaskill, JS and Otten, H "Traveling Waves of in vitro Evolving RNA" Proceedings of the National Academy of Sciences of the United States of America (1989) 86(20) 7937-7941. http://dx.doi.org/10.1073/pnas.86.20.7937
Bauer, GJ, McCaskill, JS, Otten, H and Schwienhorst, A "Evolution in the laboratory" Nachr. Chem. Tech. Lab. (1989) 37(484-488.
McCaskill, JS "The Equilibrium Partition-Function and Base Pair Binding Probabilities for RNA Secondary Structure" Biopolymers (1990) 29(6-7) 1105-1119. http://dx.doi.org/10.1002/bip.360290621
McCaskill, JS "The equilibrium distribution of secondary structures for large RNA" (1990) in Ed:Jovin, T and Soumpasis, M Computation of Biomolecular Structures: Achievements, Problems and Perspectives (Springer Verlag Berlin Heidelberg New York 1992) 29-42.
McCaskill, JS "How is genetic information generated?" (1991) in Ed:Andersson, S, Andersson, ÅE and Ottoson, U Theory and control of dynamical systems. Applications to systems in biology. (Huddinge, Stockholm, Sweden) (World Scientific Press, Singapore, 1992) 137-164.
Jockusch, SR and McCaskill, JS "Evolutionary construction of topology conserving neural nets" (1992) in Ed:Aleksander, I and Taylor, J Artificial Neural Networks II: Proc. of the Intnl Conf. on Artificial Neural Networks - ICANN 92 (Elsevier Science Publishers B.V. Amsterdam.) Pages ????
Bonhoeffer, S, McCaskill, JS, Stadler, PF and Schuster, P "Temperature dependent RNA landscapes. A study based on partition functions" Eur. J. Biophys. (1992) 22(1-4.
Yin, J and McCaskill, JS "Replication of Viruses in a Growing Plaque - a Reaction-Diffusion Model" Biophysical Journal (1992) 61(6) 1540-1549. <Go to ISI>://A1992HZ26600009
Biebricher, CK, Eigen, M and McCaskill, JS "Template-Directed and Template-Free Rna-Synthesis by Q-Beta Replicase" Journal of Molecular Biology (1993) 231(2) 175-179. http://dx.doi.org/10.1006/jmbi.1993.1271
Bonhoeffer, S, McCaskill, JS, Stadler, PF and Schuster, P "RNA Multistructure Landscapes - a Study Based on Temperature-Dependent Partition-Functions" European Biophysics Journal with Biophysics Letters (1993) 22(1) 13-24. <Go to ISI>://A1993LC27700003
McCaskill, JS and Bauer, GJ "Images of Evolution - Origin of Spontaneous Rna Replication Waves" Proceedings of the National Academy of Sciences of the United States of America (1993) 90(9) 4191-4195. http://dx.doi.org/10.1073/pnas.90.9.4191
Dapprich, J, McCaskill, JS, Volker, S and Krause, F "Fluorescence Imaging of Evolving RNA in Capillaries" Berichte Der Bunsen-Gesellschaft-Physical Chemistry Chemical Physics (1994) 98(9) 1202-1202. <Go to ISI>://A1994PK38600026