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BioMIP Research Group

MICROSYSTEMS CHEMISTRY AND BIOMOLECULAR INFORMATION PROCESSING

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RUB Context

  • BioMIP intern
  • Fac. Chemistry and Biochemistry
  • RD Interfacial Systems Chemistry
  • Ruhr-Universität Bochum

International Projects

  • MICREAgents Project
  • Eur. Centre Living Technology
  • TRUCE CA- Unconventional Computing

Recent Projects

  • COBRA CA Biochem_IT
  • ‎CADMAD Project
  • Matrix for Chemical IT (FP7 2009-12)
  • COST Systems Chemistry (2008-15)
  • ECCell Project (FP7 2008-12)
  • HepatoSys Project (BMBF 2004-10)
  • PACE Project (FP6 2004-8)
  • SPLiT (proposed ICT Flagship 2010)

Hepatosys

  • Mesoscale systems simulation
  • Protein sorting
  • Collaboration partners

Protein sorting

  • a hierarchy of successively simpler Heinrich models
  • combinatorially complex sorting
  • DPD model with explicit compartments
  • spatially resolved Heinrich model
  • stochastic diffusive Heinrich models

Reference

  • Generation of nonidentical compartments in vesicular transport systems -- Heinrich and Rapoport (2005) J. Cell Biol. 168 271

spatially resolved Heinrich model

extension of the model to include spatial effects via a reaction diffusion model  in 1D, 2D and 3D


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